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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942822.1_cds_XP_016486170.1_77029
CDS Infomation

[gene=LOC107806520] [db_xref=GeneID:107806520] [protein=jasmonic acid-amido synthetase JAR1-like isoform X2] [protein_id=XP_016486170.1] [location=complement(join(8986..9527,10025..10812,11395..11496,11865..12160))] [gbkey=CDS]
Sequence

ATGGTGGTAGAGAAAACTGAGAAGTTTGATCCACAAGAAGTAATTGAGGAATTTGAGGTG
TTAACAAGAGATGCTGGCAAAATTCAAGAAGAGACACTACAGAAGATTTTGGAAGAAAAT
GGAGGGACAGAATATTTGCAGCAATGGGGTCTGAATGGGAAAACTGACTCATTGTCTTTC
AAGAATTGTGTACCCATTGTCACCCACAAGGATTTGGAGCCTTACATTCATAGAATTACT
GATGGTGATCTTTCTCCCATTCTTACTGGAAAACCTATTACCACTATCTCCTTGAGTTCT
GGGACAACTCAGGGAAAGCCAAAGTTTGTACCTTTCAATGAAGAATTGATGGAATCCACT
ATGCAAATATTCAAGACATCTTTTGCCTTTAGGAACAGAGAATTCCCAGTTGTAAATGGG
AAAGCTTTGCAGTTCATATATGGCAGCAAGCAATTCAAGACGAAGGGTGGTTTGGCAGCT
GGAACTGCCACTACCAATGTGTACCGAAACGCACAATTCAAGAAGACAATGAGGGCAATG
CAGACCCCTTGTTGTAGCCCTGATGAAGTGATATTTGGCCCTGATTTCCAACAATCTTTG
TACTGTCATCTTTTGTGCGGCCTCATTTTTCGCGATGAGGTTCAAGTTGTCTCTTCTACG
TTTGCCCATAGTATTGTCCATGCTTTTCGAAATTTCGAACAAGTATGGCAAGAACTTGTT
ACCAACATAAGAGAAGGAGTACTTTCTAGCCGTGTGACGGTTCCTTCTATGAGAGCAGCA
ATGTCGAAATTACTCAAGCCTGATCCCGAGCTTGCTGATACTATTTTTAACAAGTGCAGC
CGATTGAGCAATTGGTATGGCTTGATACCTGAACTTTTCCCGAACACTAGGTACATATAT
GGTATCATGACTGGATCCATGGAACCTTACTTGAAGAAACTGAGGCATTATGCGGGCGAG
TTACCTCTGCTAAGTGCTGATTATGGATCTTCTGAAGGGTGGATTGGAGCAAACGTTAAC
CCCGAGTTGCCTCCCGAGCTTGTTACATATGCAGTACTTCCTAATATTGGTTATTTCGAA
TTCATTCCTCTCATGGAAAATTTAGACGGTCTGGAGCCTACGCCAGTCGGTTTAACTGAA
GTTAAACTCGGCGAAGAGTATGAAATTGTAGTCACCAACTTTGCAGGTCTGTATCGCTAT
AGGCTCGGTGATGTTGTCAAGATAAAAGGATTCCACAATGGCACTCCGGAACTCCAGTTT
ATTTGCCGTAGGAATCTCTTGTTGAGCATCAACATTGACAAGAACACCGAGAAAGACTTA
CAACTAGCCGTGGAAGCAGCAGCCAAGATCTTATCAGACGAAAAGCTAGAAGTAGTCGAT
TTCACTAGCCACGTCAATGTCTCAGCTGATCCGGGGCACTACGTGATCTTCTGGGAACTG
AGTGGTGAGGCCACTGAGGAAATCTTGAAAGATTGCTGCAATTGTTTGGACAAATCTTTC
GTCGATGCAGGCTATGTGGGCTCTCGGAAGGTGAATGCAATTGGAGCTCTTGAGCTCCGA
ATTGTGAAGAGGGGAACATTCCATAAGATATTAGATCATTTTGTAGGATTAGGGGCTGCA
GTAAGCCAGTTCAAAACACCAAGGTGCGTCGGCCCGACTAATCTCTCTGTGCTGCAAATA
CTGTCAAGCAATGTAGTTGAGAGCTATTTTAGTACTGCATTATGTTGA

Peptide Sequence

PEP ID

XP_016486170.1
PEP Infomation

PREDICTED: jasmonic acid-amido synthetase JAR1-like isoform X2 [Nicotiana tabacum]
Sequence

MVVEKTEKFDPQEVIEEFEVLTRDAGKIQEETLQKILEENGGTEYLQQWGLNGKTDSLSF
KNCVPIVTHKDLEPYIHRITDGDLSPILTGKPITTISLSSGTTQGKPKFVPFNEELMEST
MQIFKTSFAFRNREFPVVNGKALQFIYGSKQFKTKGGLAAGTATTNVYRNAQFKKTMRAM
QTPCCSPDEVIFGPDFQQSLYCHLLCGLIFRDEVQVVSSTFAHSIVHAFRNFEQVWQELV
TNIREGVLSSRVTVPSMRAAMSKLLKPDPELADTIFNKCSRLSNWYGLIPELFPNTRYIY
GIMTGSMEPYLKKLRHYAGELPLLSADYGSSEGWIGANVNPELPPELVTYAVLPNIGYFE
FIPLMENLDGLEPTPVGLTEVKLGEEYEIVVTNFAGLYRYRLGDVVKIKGFHNGTPELQF
ICRRNLLLSINIDKNTEKDLQLAVEAAAKILSDEKLEVVDFTSHVNVSADPGHYVIFWEL
SGEATEEILKDCCNCLDKSFVDAGYVGSRKVNAIGALELRIVKRGTFHKILDHFVGLGAA
VSQFKTPRCVGPTNLSVLQILSSNVVESYFSTALC

Transcript Sequence

Gene sequence data has not been registered.